Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: CG12084 FBgn0043458

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Gene Synonyms

Location

Primary_assembly 3L: 1,490,951-1,496,643 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants) and 118 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12084-RA	FBtr0072711	3148	793aa	FBpp0072595	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0E8	NM_138268 NM_138268.2 NP_612112 NP_612112.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG12084-RB	FBtr0332656	3483	765aa	FBpp0304902	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBH9	NM_001274328 NM_001274328.1 NP_001261257 NP_001261257.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays