Chromator
Primary_assembly 3L: 22,873,702-22,878,984 reverse strand.
BDGP6.32:AE014296.5
This gene has 5 transcripts (splice variants) and 75 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Chro-RE | FBtr0346095 | 4056 | 926aa | FBpp0311928 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86BS3 | NM_001275297.1 NM_001300221 NM_001300221.1 NM_141169.3 NM_168975.2 NM_168976.2 NP_001262226.1 NP_001287150 NP_001287150.1 NP_649426.3 NP_730762.2 NP_730763.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Chro-RD | FBtr0332053 | 3915 | 926aa | FBpp0304363 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86BS3 | NM_001275297 NM_001275297.1 NM_001300221.1 NM_141169.3 NM_168975.2 NM_168976.2 NP_001262226 NP_001262226.1 NP_001287150.1 NP_649426.3 NP_730762.2 NP_730763.2 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Chro-RA | FBtr0078570 | 3871 | 926aa | FBpp0078221 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86BS3 | NM_001275297.1 NM_001300221.1 NM_141169 NM_141169.3 NM_168975.2 NM_168976.2 NP_001262226.1 NP_001287150.1 NP_649426 NP_649426.3 NP_730762.2 NP_730763.2 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Chro-RB | FBtr0078568 | 3840 | 926aa | FBpp0078219 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86BS3 | NM_001275297.1 NM_001300221.1 NM_141169.3 NM_168975 NM_168975.2 NM_168976.2 NP_001262226.1 NP_001287150.1 NP_649426.3 NP_730762 NP_730762.2 NP_730763.2 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Chro-RC | FBtr0078569 | 3771 | 926aa | FBpp0078220 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5MAI1 Q86BS3 Q8T9D1 | NM_001275297.1 NM_001300221.1 NM_141169.3 NM_168975.2 NM_168976 NM_168976.2 NP_001262226.1 NP_001287150.1 NP_649426.3 NP_730762.2 NP_730763 NP_730763.2 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
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