Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
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DB built by FlyBase

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Gene: metro FBgn0050021

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Description

menage a trois

Location

Primary_assembly 2R: 11,226,458-11,232,516 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 124 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
metro-RA	FBtr0088196	2782	595aa	FBpp0087292	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8G0	NM_136798 NM_136798.3 NP_610642 NP_610642.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
metro-RC	FBtr0114570	2752	585aa	FBpp0113062	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF0	NM_001144171 NM_001144171.2 NP_001137643 NP_001137643.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
metro-RB	FBtr0114569	2665	556aa	FBpp0113061	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T5S9	NM_001144170 NM_001144170.2 NP_001137642 NP_001137642.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
metro-RD	FBtr0339484	2635	546aa	FBpp0308566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF49	NM_001299380 NM_001299380.1 NP_001286309 NP_001286309.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1

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Summary

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Gene-based displays