Summary
- Splice variants
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Sequence
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Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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- GO: Molecular function
- GO: Biological process
- GO: Cellular component
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG31064 FBgn0051064

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Location

Primary_assembly 3R: 27,229,505-27,239,085 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 6 transcripts (splice variants), 126 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG31064-RG	FBtr0339249	3111	877aa	FBpp0308356	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHR8	NM_001300631 NM_001300631.1 NP_001287560 NP_001287560.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG31064-RE	FBtr0085126	3645	862aa	FBpp0084496	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C5WLQ7 Q8IGZ4 Q8IMP0 Q961F7	NM_143288 NM_143288.4 NP_651545 NP_651545.2	-
CG31064-RF	FBtr0339248	3504	815aa	FBpp0308355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHR2	NM_001300630 NM_001300630.1 NP_001287559 NP_001287559.1	-
CG31064-RH	FBtr0347560	3413	700aa	FBpp0312593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GV26 C5WLQ7	NM_001316619 NM_001316619.1 NP_001303548 NP_001303548.1	-
CG31064-RA	FBtr0085124	2985	667aa	FBpp0084494	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMP1	NM_170325 NM_170325.3 NP_733204 NP_733204.1	-
CG31064-RB	FBtr0085125	2687	729aa	FBpp0084495	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86P45 Q8IMP2	NM_170324 NM_170324.3 NP_733203 NP_733203.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays