Summary
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- GO: Biological process
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DB built by FlyBase

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Gene: SKIP FBgn0051163

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Description

Shal K[+] channel interacting protein

Gene Synonyms

Location

Primary_assembly 3R: 22,133,830-22,296,126 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 7 transcripts (splice variants) and 48 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SKIP-RI	FBtr0330381	5049	1080aa	FBpp0303407	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHV7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
SKIP-RJ	FBtr0336712	6669	1027aa	FBpp0307693	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHM3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
SKIP-RF	FBtr0305036	6584	1064aa	FBpp0293573	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI30	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
SKIP-RG	FBtr0305037	6489	1034aa	FBpp0293574	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6C1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
SKIP-RE	FBtr0301028	5788	1064aa	FBpp0290250	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI30	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
SKIP-RB	FBtr0084197	5049	952aa	FBpp0083595	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SZS0 Q8T9B0 Q95RX2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
SKIP-RH	FBtr0310203	508	128aa	FBpp0301887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH49	-	-

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Summary

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