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DB built by FlyBase

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Gene: Unc-115a FBgn0051352

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Description

Uncoordinated 115a

Gene Synonyms

Location

Primary_assembly 3R: 9,694,386-9,705,417 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 8 transcripts (splice variants), 179 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Unc-115a-RB	FBtr0300564	3551	844aa	FBpp0289791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIH3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Unc-115a-RG	FBtr0344276	3700	828aa	FBpp0310681	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGY1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Unc-115a-RE	FBtr0339597	3557	787aa	FBpp0308669	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGZ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Unc-115a-RF	FBtr0344275	3494	825aa	FBpp0310680	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LI11	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Unc-115a-RJ	FBtr0346714	3299	813aa	FBpp0312325	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIH1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Unc-115a-RA	FBtr0082092	3278	806aa	FBpp0081570	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VH91	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Unc-115a-RC	FBtr0300565	3200	839aa	FBpp0289792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIH2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Unc-115a-RH	FBtr0344277	3176	772aa	FBpp0310682	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGY0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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