Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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DB built by FlyBase

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Gene: CG31644 FBgn0051644

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Gene Synonyms

Location

Primary_assembly 2L: 5,817,890-5,818,443 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 13 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG31644-RC	FBtr0342622	489	90aa	FBpp0309557	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JD93	NM_001298711 NM_001298711.1 NP_001285640 NP_001285640.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG31644-RA	FBtr0079159	480	87aa	FBpp0078790	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T970	NM_164663 NM_164663.3 NP_723121 NP_723121.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG31644-RB	FBtr0342621	474	85aa	FBpp0309556	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J713	NM_001298710 NM_001298710.1 NP_001285639 NP_001285639.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays