Summary
- Splice variants
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DB built by FlyBase

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Gene: fred FBgn0051774

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Description

friend of echinoid

Gene Synonyms

Location

Primary_assembly 2L: 3,902,928-3,991,713 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 177 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
fred-RH	FBtr0308127	4925	1447aa	FBpp0300449	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A023GPK8 C4IXX2 Q8MZ57	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
fred-RF	FBtr0308125	7149	1323aa	FBpp0300447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G4LU27 M9NCR3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
fred-RG	FBtr0308126	4922	1198aa	FBpp0300448	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQW1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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