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DB built by FlyBase

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Gene: dpr10 FBgn0052057

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Description

defective proboscis extension response 10

Gene Synonyms

Location

Primary_assembly 3L: 10,147,454-10,186,108 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 250 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
dpr10-RC	FBtr0076310	3531	408aa	FBpp0076039	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VT83	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
dpr10-RA	FBtr0076308	3448	408aa	FBpp0076037	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MS24 Q9VT83	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
dpr10-RB	FBtr0076309	3371	408aa	FBpp0076038	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VT83	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
dpr10-RD	FBtr0331552	3310	362aa	FBpp0303942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF17	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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