Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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Genetic Variation
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DB built by FlyBase

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Gene: CG32473 FBgn0052473

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Location

Primary_assembly 3R: 13,302,648-13,312,785 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 144 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG32473-RC	FBtr0082743	3635	1025aa	FBpp0082211	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C7LAE2 D3PFE8 Q8INH6 Q95S62	NM_169504 NM_169504.3 NP_731787 NP_731787.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG32473-RA	FBtr0082742	3273	1012aa	FBpp0082210	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJT1 Q86P55 Q8IGR1 Q9VFW7	NM_169503 NM_169503.3 NP_731786 NP_731786.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG32473-RB	FBtr0082744	3002	903aa	FBpp0082212	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INH5	NM_142019 NM_142019.3 NP_650276 NP_650276.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays