Summary
- Splice variants
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Metazoan Compara
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- GO: Cellular component
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DB built by FlyBase

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Gene: Rtnl1 FBgn0053113

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Description

Reticulon-like1

Location

Primary_assembly 2L: 4,992,808-5,009,720 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 11 transcripts (splice variants), 46 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rtnl1-RF	FBtr0079038	2700	595aa	FBpp0078674	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMV9	NM_175969 NM_175969.3 NP_787983 NP_787983.1
Rtnl1-RJ	FBtr0301540	2311	234aa	FBpp0290755	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTP4	NM_001169405.2 NM_001169406 NM_001169406.2 NM_175970.3 NM_175971.3 NP_001162876.1 NP_001162877 NP_001162877.1 NP_787984.1 NP_787985.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Rtnl1-RG	FBtr0079044	2271	224aa	FBpp0078680	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TP45 Q9VMW1	NM_175972.3 NM_205908 NM_205908.2 NP_787986.1 NP_995630 NP_995630.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
Rtnl1-RH	FBtr0301538	2231	607aa	FBpp0290753	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHT6 Q6NP20	NM_001169404 NM_001169404.2 NP_001162875 NP_001162875.1
Rtnl1-RB	FBtr0079039	1539	234aa	FBpp0078675	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTP4	NM_001169405.2 NM_001169406.2 NM_175970 NM_175970.3 NM_175971.3 NP_001162876.1 NP_001162877.1 NP_787984 NP_787984.1 NP_787985.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Rtnl1-RE	FBtr0079040	1511	234aa	FBpp0078676	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTP4	NM_001169405.2 NM_001169406.2 NM_175970.3 NM_175971 NM_175971.3 NP_001162876.1 NP_001162877.1 NP_787984.1 NP_787985 NP_787985.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Rtnl1-RI	FBtr0301539	1495	234aa	FBpp0290754	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTP4	NM_001169405 NM_001169405.2 NM_001169406.2 NM_175970.3 NM_175971.3 NP_001162876 NP_001162876.1 NP_001162877.1 NP_787984.1 NP_787985.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Rtnl1-RL	FBtr0332413	1475	222aa	FBpp0304686	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHT9	NM_001169407 NM_001169407.2 NP_001162878 NP_001162878.2
Rtnl1-RA	FBtr0079042	1428	222aa	FBpp0078678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMW4	NM_175973 NM_175973.3 NP_787987 NP_787987.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
Rtnl1-RC	FBtr0079043	1267	202aa	FBpp0078679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMW2	NM_175974 NM_175974.3 NP_787988 NP_787988.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
Rtnl1-RD	FBtr0079041	1000	224aa	FBpp0078677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMW1	NM_175972 NM_175972.3 NM_205908.2 NP_787986 NP_787986.1 NP_995630.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1

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Summary

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Gene-based displays