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DB built by FlyBase

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Gene: Mical FBgn0053208

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Description

Molecule interacting with CasL

Gene Synonyms

Location

Primary_assembly 3R: 10,001,554-10,042,895 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 14 transcripts (splice variants) and 22 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mical-RL	FBtr0306609	15345	4743aa	FBpp0297564	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6D5	NM_001260086 NM_001260086.3 NP_001247015 NP_001247015.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Mical-RN	FBtr0347211	15585	3029aa	FBpp0312509	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6N6 D4G7B5	NM_001260087 NM_001260087.3 NP_001247016 NP_001247016.2	-
Mical-RF	FBtr0082209	15312	4723aa	FBpp0081687	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BA1	NM_001144560.3 NM_176443.2 NM_176444.2 NM_176445.2 NM_176446.2 NM_176447 NM_176447.2 NM_176448.2 NM_176449.3 NM_176450.1 NP_001138032.1 NP_788620.1 NP_788621.1 NP_788622.1 NP_788623.1 NP_788624 NP_788624.1 NP_788625.1 NP_788626.2 NP_788627.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RK	FBtr0306608	15264	4732aa	FBpp0297563	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K703 F0JAH5	NM_001260085 NM_001260085.2 NP_001247014 NP_001247014.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RP	FBtr0347213	15210	4689aa	FBpp0312511	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GUS4	NM_001316573 NM_001316573.1 NP_001303502 NP_001303502.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RC	FBtr0082210	15190	4723aa	FBpp0081688	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BA1	NM_001144560.3 NM_176443.2 NM_176444.2 NM_176445 NM_176445.2 NM_176446.2 NM_176447.2 NM_176448.2 NM_176449.3 NM_176450.1 NP_001138032.1 NP_788620.1 NP_788621.1 NP_788622 NP_788622.1 NP_788623.1 NP_788624.1 NP_788625.1 NP_788626.2 NP_788627.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RD	FBtr0082213	15146	4723aa	FBpp0081691	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BA1	NM_001144560.3 NM_176443.2 NM_176444.2 NM_176445.2 NM_176446 NM_176446.2 NM_176447.2 NM_176448.2 NM_176449.3 NM_176450.1 NP_001138032.1 NP_788620.1 NP_788621.1 NP_788622.1 NP_788623 NP_788623.1 NP_788624.1 NP_788625.1 NP_788626.2 NP_788627.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RG	FBtr0082212	15086	4723aa	FBpp0081690	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BA1	NM_001144560.3 NM_176443.2 NM_176444.2 NM_176445.2 NM_176446.2 NM_176447.2 NM_176448 NM_176448.2 NM_176449.3 NM_176450.1 NP_001138032.1 NP_788620.1 NP_788621.1 NP_788622.1 NP_788623.1 NP_788624.1 NP_788625 NP_788625.1 NP_788626.2 NP_788627.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RO	FBtr0347212	15030	4700aa	FBpp0312510	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_176449 NP_788626	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RB	FBtr0082207	10149	3002aa	FBpp0081685	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_176444 NM_176444.2 NP_788621 NP_788621.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RQ	FBtr0347214	10116	2991aa	FBpp0312512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GUS6	NM_001316574 NM_001316574.1 NP_001303503 NP_001303503.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RE	FBtr0082208	9345	2734aa	FBpp0081686	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_176443 NM_176443.2 NP_788620 NP_788620.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mical-RA	FBtr0082206	2806	810aa	FBpp0081684	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_176450 NM_176450.1 NP_788627 NP_788627.1	-
Mical-RI	FBtr0273185	2560	789aa	FBpp0271693	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001144560 NM_001144560.3 NP_001138032 NP_001138032.1	-

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Summary

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Gene-based displays