Primary_assembly 3R: 16,154,982-16,171,766 forward strand.
BDGP6.32:AE014297.3
This gene has 5 transcripts (splice variants), 415 orthologues and 39 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| CG6006-RC | FBtr0113477 | 3869 | 603aa | FBpp0112387 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2RVG5 Q8MQI2 | NM_001104342 NM_001104342.4 NP_001097812 NP_001097812.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG6006-RE | FBtr0309302 | 3739 | 569aa | FBpp0301217 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VEY2 | NM_001260203.1 NM_001260204 NM_001260204.1 NM_001260205.1 NM_142268.2 NP_001247132.1 NP_001247133 NP_001247133.1 NP_001247134.1 NP_650525.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG6006-RD | FBtr0309301 | 2790 | 569aa | FBpp0301216 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VEY2 | NM_001260203 NM_001260203.1 NM_001260204.1 NM_001260205.1 NM_142268.2 NP_001247132 NP_001247132.1 NP_001247133.1 NP_001247134.1 NP_650525.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG6006-RB | FBtr0083252 | 2772 | 569aa | FBpp0082706 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VEY2 | NM_001260203.1 NM_001260204.1 NM_001260205.1 NM_142268 NM_142268.2 NP_001247132.1 NP_001247133.1 NP_001247134.1 NP_650525 NP_650525.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG6006-RF | FBtr0309303 | 2716 | 569aa | FBpp0301218 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VEY2 | NM_001260203.1 NM_001260204.1 NM_001260205 NM_001260205.1 NM_142268.2 NP_001247132.1 NP_001247133.1 NP_001247134 NP_001247134.1 NP_650525.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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