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DB built by FlyBase

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Gene: RpL5 FBgn0064225

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Description

Ribosomal protein L5

Gene Synonyms

Location

Primary_assembly 2L: 22,532,279-22,536,884 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 138 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RpL5-RH	FBtr0344793	3835	299aa	FBpp0311121	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NL81 Q6NMY6 Q9NIU2 Q9W5R8 R9Q794	NM_001042922.3 NM_001042923.3 NM_001042925.3 NM_001042926 NM_001042926.2 NP_001036387.1 NP_001036388.1 NP_001036390.2 NP_001036391 NP_001036391.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RpL5-RG	FBtr0332633	1945	299aa	FBpp0304879	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W5R8 R9Q794	NM_001042922.3 NM_001042923.3 NM_001042925 NM_001042925.3 NM_001042926.2 NP_001036387.1 NP_001036388.1 NP_001036390 NP_001036390.2 NP_001036391.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RpL5-RA	FBtr0111129	1079	299aa	FBpp0110421	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W5R8 R9Q794	NM_001042922 NM_001042922.3 NM_001042923.3 NM_001042925.3 NM_001042926.2 NP_001036387 NP_001036387.1 NP_001036388.1 NP_001036390.2 NP_001036391.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RpL5-RB	FBtr0111132	1024	299aa	FBpp0110424	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W5R8 R9Q794	NM_001042922.3 NM_001042923 NM_001042923.3 NM_001042925.3 NM_001042926.2 NP_001036387.1 NP_001036388 NP_001036388.1 NP_001036390.2 NP_001036391.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays