Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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DB built by FlyBase

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Gene: CG34133 FBgn0083969

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Location

Primary_assembly 3R: 29,869,365-29,875,159 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 168 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG34133-RC	FBtr0301073	4263	1108aa	FBpp0290295	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K501 Q8IMK1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG34133-RE	FBtr0335004	4209	1090aa	FBpp0307012	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHB8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG34133-RB	FBtr0110888	3831	1078aa	FBpp0110188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KHZ4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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