Rad, Gem/Kir family member 3
Primary_assembly 2R: 21,255,165-21,280,995 forward strand.
BDGP6.32:AE013599.5
This gene has 4 transcripts (splice variants), 142 orthologues and 16 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Rgk3-RE | FBtr0342882 | 2651 | 486aa | FBpp0309683 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A076NAB7 A9UN72 Q6IH08 | NM_001299741 NM_001299741.1 NP_001286670 NP_001286670.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Rgk3-RF | FBtr0342883 | 3795 | 449aa | FBpp0309684 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYK6 D0IQG6 Q1RKS5 Q4V6H6 | NM_001032275 NM_001032275.2 NM_001103925.3 NM_001103926.4 NP_001027446 NP_001027446.2 NP_001097395.1 NP_001097396.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Rgk3-RG | FBtr0347186 | 3293 | 449aa | FBpp0312497 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYK6 | NM_001032275.2 NM_001103925.3 NM_001103926 NM_001103926.4 NP_001027446.2 NP_001097395.1 NP_001097396 NP_001097396.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Rgk3-RC | FBtr0112646 | 2540 | 449aa | FBpp0111558 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYK6 | NM_001032275.2 NM_001103925 NM_001103925.3 NM_001103926.4 NP_001027446.2 NP_001097395 NP_001097395.1 NP_001097396.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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