Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
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Genetic Variation
- Variant table
- Variant image
- Structural variants
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DB built by FlyBase

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Gene: CG34398 FBgn0085427

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Location

Chromosome 2L: 8,898,786-8,933,594 forward strand.

BDGP6.28:AE014134.6

About this gene

This gene has 10 transcripts (splice variants) and 55 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0303889	7295	1784aa	FBpp0292892	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYX9	NM_001103658.3 NM_001201808.2 NM_001201809.2 NP_001097128.1 NP_001188737.1 NP_001188738.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0112648	6983	1930aa	FBpp0111560	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYY0	NM_001103657.3 NM_001201811.2 NP_001097127.1 NP_001188740.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0303892	6885	1930aa	FBpp0292895	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYY0 Q059C9	NM_001103657.3 NM_001201811.2 NP_001097127.1 NP_001188740.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0340260	6380	1757aa	FBpp0309227	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JDL7	NM_001298837.1 NP_001285766.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0303893	6299	1702aa	FBpp0292896	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z392 M9MRP7	NM_001201812.2 NP_001188741.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0112649	6047	1784aa	FBpp0111561	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYX9	NM_001103658.3 NM_001201808.2 NM_001201809.2 NP_001097128.1 NP_001188737.1 NP_001188738.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0303890	5990	1784aa	FBpp0292893	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYX9	NM_001103658.3 NM_001201808.2 NM_001201809.2 NP_001097128.1 NP_001188737.1 NP_001188738.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0303894	5790	1673aa	FBpp0292897	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QCS4	NM_001169443.3 NP_001162914.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0303891	5373	1611aa	FBpp0292894	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSH2 Q95U17	NM_001201810.2 NP_001188739.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0340259	5131	1500aa	FBpp0309226	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J7J2	NM_001298836.1 NP_001285765.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays