like-AP180
Primary_assembly 3R: 7,186,994-7,200,941 forward strand.
BDGP6.32:AE014297.3
This gene has 9 transcripts (splice variants) and 140 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| lap-RD | FBtr0302184 | 5216 | 788aa | FBpp0291394 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JJ78 | NM_001170067 NM_001170067.2 NP_001163538 NP_001163538.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| lap-RI | FBtr0334887 | 5180 | 776aa | FBpp0306908 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KFE2 | NM_001275410 NM_001275410.1 NP_001262339 NP_001262339.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| lap-RC | FBtr0302183 | 5126 | 758aa | FBpp0291393 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z0U7 C1C3H4 | NM_001144547 NM_001144547.3 NP_001138019 NP_001138019.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| lap-RH | FBtr0334886 | 4964 | 704aa | FBpp0306907 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KGC6 | NM_001275409 NM_001275409.1 NP_001262338 NP_001262338.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| lap-RJ | FBtr0334888 | 4886 | 678aa | FBpp0306909 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KF90 | NM_001275411 NM_001275411.1 NP_001262340 NP_001262340.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| lap-RG | FBtr0305155 | 4871 | 673aa | FBpp0293685 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K6V2 | NM_001260031 NM_001260031.2 NP_001246960 NP_001246960.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| lap-RA | FBtr0081572 | 4341 | 468aa | FBpp0081091 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VI75 | NM_079528 NM_079528.3 NP_524252 NP_524252.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| lap-RF | FBtr0305154 | 3249 | 685aa | FBpp0293684 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K631 | NM_001260030 NM_001260030.2 NP_001246959 NP_001246959.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| lap-RE | FBtr0305153 | 2984 | 572aa | FBpp0293683 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K603 | NM_001260029 NM_001260029.2 NP_001246958 NP_001246958.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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