Summary
- Splice variants
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Sequence
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Metazoan Compara
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Cellular component
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DB built by FlyBase

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Gene: side-VIII FBgn0086604

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Description

sidestep VIII

Gene Synonyms

Location

Primary_assembly 2R: 20,424,338-20,478,951 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 88 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
side-VIII-RB	FBtr0112775	5113	1201aa	FBpp0111687	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYJ6	NM_001103912 NM_001103912.3 NP_001097382 NP_001097382.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
side-VIII-RD	FBtr0273284	5092	1194aa	FBpp0271792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZM1 Q4V6U5	NM_001144248 NM_001144248.2 NP_001137720 NP_001137720.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
side-VIII-RE	FBtr0342690	4936	1142aa	FBpp0309581	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYJ7	NM_001103913 NM_001103913.3 NP_001097383 NP_001097383.3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
side-VIII-RA	FBtr0112774	3109	736aa	FBpp0111686	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEG5 Q8MYS2	NM_166392 NM_166392.4 NP_725963 NP_725963.3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays