ventral veins lacking
Primary_assembly 3L: 6,790,158-6,794,941 forward strand.
BDGP6.32:AE014296.5
This gene has 5 transcripts (splice variants), 123 orthologues and 3 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| vvl-RF | FBtr0346999 | 4380 | 742aa | FBpp0312431 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0S0WGV5 | NM_001316455 NM_001316455.1 NP_001303384 NP_001303384.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| vvl-RD | FBtr0345911 | 4784 | 427aa | FBpp0311831 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8E6G8 P16241 | NM_001300028 NM_001300028.1 NM_079224.5 NP_001286957 NP_001286957.1 NP_523948.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| vvl-RC | FBtr0330059 | 4380 | 713aa | FBpp0303092 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JI48 | NM_001169884 NM_001169884.2 NP_001163355 NP_001163355.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| vvl-RE | FBtr0346998 | 4380 | 726aa | FBpp0312430 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0S0WNN1 | NM_001316454 NM_001316454.1 NP_001303383 NP_001303383.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| vvl-RA | FBtr0076944 | 4380 | 427aa | FBpp0076653 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8E6G8 P16241 | NM_001300028.1 NM_079224 NM_079224.5 NP_001286957.1 NP_523948 NP_523948.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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