Summary
- Splice variants
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DB built by FlyBase

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Gene: stv FBgn0086708

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Description

starvin

Gene Synonyms

Location

Primary_assembly 3L: 13,477,541-13,483,515 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 7 transcripts (splice variants) and 32 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
stv-RE	FBtr0113425	3357	635aa	FBpp0112337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNS4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
stv-RF	FBtr0332078	3282	610aa	FBpp0304388	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCD9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
stv-RA	FBtr0075806	3279	609aa	FBpp0075548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VU81	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
stv-RC	FBtr0075808	2570	542aa	FBpp0075550	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VU82	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
stv-RG	FBtr0332079	2499	516aa	FBpp0304389	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VU83	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
stv-RB	FBtr0075807	2496	516aa	FBpp0075549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VU83	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
stv-RD	FBtr0075809	2491	516aa	FBpp0075551	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VU83	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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