Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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DB built by FlyBase

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Gene: apolpp FBgn0087002

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Description

apolipophorin

Gene Synonyms

Location

Primary_assembly 4: 1,060,969-1,077,273 forward strand.

BDGP6.32:AE014135.4

About this gene

This gene has 4 transcripts (splice variants), 135 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
apolpp-RB	FBtr0334627	11356	3351aa	FBpp0306689	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPS3 Q9V496	NM_001272156 NM_001272156.1 NM_001297791.1 NM_001297792.1 NM_079895.3 NP_001259085 NP_001259085.1 NP_001284720.1 NP_001284721.1 NP_524634.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
apolpp-RD	FBtr0345297	10412	3351aa	FBpp0311464	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPS3 Q9V496	NM_001272156.1 NM_001297791.1 NM_001297792 NM_001297792.1 NM_079895.3 NP_001259085.1 NP_001284720.1 NP_001284721 NP_001284721.1 NP_524634.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
apolpp-RC	FBtr0345296	10338	3351aa	FBpp0311463	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPS3 Q9V496	NM_001272156.1 NM_001297791 NM_001297791.1 NM_001297792.1 NM_079895.3 NP_001259085.1 NP_001284720 NP_001284720.1 NP_001284721.1 NP_524634.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
apolpp-RA	FBtr0089188	10287	3351aa	FBpp0088252	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C7LAA3 L0MPS3 Q1RKX2 Q9V496	NM_001272156.1 NM_001297791.1 NM_001297792.1 NM_079895 NM_079895.3 NP_001259085.1 NP_001284720.1 NP_001284721.1 NP_524634 NP_524634.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays