Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Gene history

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DB built by FlyBase

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Gene: corn FBgn0259173

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Location

Chromosome 3L: 7,142,991-7,157,073 reverse strand.

BDGP6.28:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 72 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0333375	5383	970aa	FBpp0305567	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBT2	NM_001274568.1 NP_001261497.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0299641	5264	1107aa	FBpp0288916	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RKS9 Q8IQ73	NM_168193.3 NP_729220.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0333374	5246	1101aa	FBpp0305566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHM1	NM_001274567.1 NP_001261496.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0299640	4234	960aa	FBpp0288915	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960M7 Q967H1 Q9VS25	NM_079230.3 NP_523954.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays