Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
- Variant image
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Gene expression
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- Gene history

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DB built by FlyBase

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Gene: CG42346 FBgn0259677

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Location

Primary_assembly X: 22,832,399-22,885,541 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 144 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42346-RD	FBtr0333178	9156	1817aa	FBpp0305380	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q059E0 Q0KHN6 Q8MZF8	NM_001042838 NM_001042838.2 NM_001042841.4 NP_001036303 NP_001036303.2 NP_001036306.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42346-RC	FBtr0333177	7849	1817aa	FBpp0305379	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KHN6	NM_001042838.2 NM_001042841 NM_001042841.4 NP_001036303.2 NP_001036306 NP_001036306.3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays