water witch
Primary_assembly 3R: 7,891,331-7,901,147 forward strand.
BDGP6.32:AE014297.3
This gene has 4 transcripts (splice variants), 135 orthologues and 1 paralogue.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| wtrw-RC | FBtr0081755 | 3758 | 986aa | FBpp0081252 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VHY7 | NM_169200.2 NM_169201.2 NM_206459 NM_206459.2 NP_731193.1 NP_731194.1 NP_996181 NP_996181.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| wtrw-RD | FBtr0339709 | 3757 | 969aa | FBpp0308766 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4LGT2 | NM_001300285 NM_001300285.1 NP_001287214 NP_001287214.1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| wtrw-RB | FBtr0081754 | 3738 | 986aa | FBpp0081251 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VHY7 | NM_169200.2 NM_169201 NM_169201.2 NM_206459.2 NP_731193.1 NP_731194 NP_731194.1 NP_996181.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| wtrw-RA | FBtr0081753 | 3651 | 986aa | FBpp0081250 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5X0K8 Q6NQV8 Q9VHY7 | NM_169200 NM_169200.2 NM_169201.2 NM_206459.2 NP_731193 NP_731193.1 NP_731194.1 NP_996181.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
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