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Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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DB built by FlyBase

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Gene: Su(var)3-3 FBgn0260397

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Description

Suppressor of variegation 3-3

Gene Synonyms

Location

Primary_assembly 3L: 20,226,381-20,230,250 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 71 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Su(var)3-3-RA	FBtr0074825	3681	890aa	FBpp0074594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0G7 Q9VW97	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Su(var)3-3-RB	FBtr0074826	3615	890aa	FBpp0074595	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0G7 Q9VW97	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Su(var)3-3-RC	FBtr0332693	3555	870aa	FBpp0304939	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFR5	-	-

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Summary

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