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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: gwl FBgn0260399

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Description

greatwall

Gene Synonyms

Location

Primary_assembly 3R: 18,746,370-18,750,360 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 77 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
gwl-RA	FBtr0083674	3099	846aa	FBpp0083089	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TN8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
gwl-RB	FBtr0331352	2970	803aa	FBpp0303770	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGX7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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