Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: CG42542 FBgn0260659

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Location

Primary_assembly 3R: 15,196,598-15,203,074 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 6 transcripts (splice variants) and 123 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42542-RD	FBtr0301104	2215	503aa	FBpp0290326	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIL1	NM_001170143.2 NM_001170144 NM_001170144.2 NP_001163614.1 NP_001163615 NP_001163615.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42542-RE	FBtr0301103	2190	503aa	FBpp0290325	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIL1	NM_001170143 NM_001170143.2 NM_001170144.2 NP_001163614 NP_001163614.1 NP_001163615.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42542-RF	FBtr0302324	2063	323aa	FBpp0291530	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4XVE8 Q7KSI9	NM_001170145 NM_001170145.2 NM_142169.4 NM_170649.2 NP_001163616 NP_001163616.1 NP_650426.1 NP_731978.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42542-RC	FBtr0301102	1675	323aa	FBpp0290324	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSI9	NM_001170145.2 NM_142169.4 NM_170649 NM_170649.2 NP_001163616.1 NP_650426.1 NP_731978 NP_731978.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42542-RB	FBtr0301101	1650	323aa	FBpp0290323	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSI9	NM_001170145.2 NM_142169 NM_142169.4 NM_170649.2 NP_001163616.1 NP_650426 NP_650426.1 NP_731978.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42542-RG	FBtr0302325	1550	313aa	FBpp0291531	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INE9	NM_169620 NM_169620.2 NP_731979 NP_731979.2

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Summary

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Gene-based displays