Primary_assembly 3R: 15,196,598-15,203,074 forward strand.
BDGP6.32:AE014297.3
This gene has 6 transcripts (splice variants) and 155 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| CG42542-RD | FBtr0301104 | 2215 | 503aa | FBpp0290326 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JIL1 | NM_001170143.2 NM_001170144 NM_001170144.2 NP_001163614.1 NP_001163615 NP_001163615.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG42542-RE | FBtr0301103 | 2190 | 503aa | FBpp0290325 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JIL1 | NM_001170143 NM_001170143.2 NM_001170144.2 NP_001163614 NP_001163614.1 NP_001163615.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG42542-RF | FBtr0302324 | 2063 | 323aa | FBpp0291530 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C4XVE8 Q7KSI9 | NM_001170145 NM_001170145.2 NM_142169.4 NM_170649.2 NP_001163616 NP_001163616.1 NP_650426.1 NP_731978.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG42542-RC | FBtr0301102 | 1675 | 323aa | FBpp0290324 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSI9 | NM_001170145.2 NM_142169.4 NM_170649 NM_170649.2 NP_001163616.1 NP_650426.1 NP_731978 NP_731978.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG42542-RB | FBtr0301101 | 1650 | 323aa | FBpp0290323 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSI9 | NM_001170145.2 NM_142169 NM_142169.4 NM_170649.2 NP_001163616.1 NP_650426 NP_650426.1 NP_731978.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG42542-RG | FBtr0302325 | 1550 | 313aa | FBpp0291531 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8INE9 | NM_169620 NM_169620.2 NP_731979 NP_731979.2 | - |
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