Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: scny FBgn0260936

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Description

scrawny

Location

Primary_assembly 3L: 5,769,002-5,776,271 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 7 transcripts (splice variants), 108 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
scny-RJ	FBtr0330128	4538	906aa	FBpp0303161	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_139729 NM_139729.3 NP_647986 NP_647986.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
scny-RG	FBtr0307975	4470	976aa	FBpp0300344	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001259710 NM_001259710.2 NM_001259711.2 NP_001246639 NP_001246639.1 NP_001246640.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
scny-RD	FBtr0077100	4417	1038aa	FBpp0076806	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VRP5	NM_001259710.2 NM_001259711.2 NM_139729.3 NM_168132 NM_168132.3 NM_168133.2 NM_168134.2 NM_168135.2 NP_001246639.1 NP_001246640.1 NP_647986.3 NP_729092 NP_729092.1 NP_729093.2 NP_729094.1 NP_729095.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
scny-RH	FBtr0307976	4303	976aa	FBpp0300345	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001259710.2 NM_001259711 NM_001259711.2 NP_001246639.1 NP_001246640 NP_001246640.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
scny-RI	FBtr0330127	3644	886aa	FBpp0303160	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_168133 NM_168133.2 NP_729093 NP_729093.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
scny-RC	FBtr0077103	3637	948aa	FBpp0076809	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_168134 NM_168134.2 NP_729094 NP_729094.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
scny-RB	FBtr0077101	3512	968aa	FBpp0076807	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_168135 NM_168135.2 NP_729095 NP_729095.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays