Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG42673 FBgn0261555

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Location

Primary_assembly 3L: 9,547,220-9,596,713 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 106 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42673-RC	FBtr0302710	3902	904aa	FBpp0291850	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_168353 NM_168353.2 NP_729510 NP_729510.1
CG42673-RB	FBtr0302709	3618	698aa	FBpp0291849	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXX4	NM_168352 NM_168352.2 NM_168353.2 NP_729509 NP_729509.1 NP_729510.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42673-RD	FBtr0302711	3582	438aa	FBpp0291851	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRS2	NM_001202149 NM_001202149.2 NP_001189078 NP_001189078.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays