Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CngA FBgn0261612

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Description

Cyclic nucleotide-gated ion channel subunit A

Gene Synonyms

Location

Primary_assembly 2R: 16,243,145-16,259,805 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 162 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CngA-RB	FBtr0302925	3994	840aa	FBpp0292051	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCU4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CngA-RA	FBtr0302924	2975	665aa	FBpp0292050	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24278	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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