nejire
Primary_assembly X: 9,665,442-9,687,066 reverse strand.
BDGP6.32:AE014298.5
This gene has 4 transcripts (splice variants) and 158 orthologues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
nej-RC | FBtr0302722 | 11704 | 3282aa | FBpp0291862 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9YKH4 M9MS40 | NM_001201646 NM_001201646.2 NP_001188575 NP_001188575.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
nej-RD | FBtr0302723 | 15729 | 3276aa | FBpp0291863 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W321 | NM_001201647 NM_001201647.2 NM_079903.4 NP_001188576 NP_001188576.1 NP_524642.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
nej-RE | FBtr0333521 | 15400 | 3266aa | FBpp0305701 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PH39 | NM_001272458 NM_001272458.1 NP_001259387 NP_001259387.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
nej-RB | FBtr0071402 | 11733 | 3276aa | FBpp0071337 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9YKH0 A9YKH7 A9YKI3 F6J532 O01368 Q95TP4 Q9W321 | NM_001201647.2 NM_079903 NM_079903.4 NP_001188576.1 NP_524642 NP_524642.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |