Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG42740 FBgn0261704

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Location

Primary_assembly 3R: 30,418,767-30,422,971 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42740-RB	FBtr0303202	4135	51aa	FBpp0292300	Gene/transcipt that contains an open reading frame (ORF).Protein coding	N0ACE7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42740-RA	FBtr0303201	4026	51aa	FBpp0292299	Gene/transcipt that contains an open reading frame (ORF).Protein coding	N0ACE7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42740-RC	FBtr0344522	2233	51aa	FBpp0310873	Gene/transcipt that contains an open reading frame (ORF).Protein coding	N0ACE7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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