Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Bsg FBgn0261822

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Description

Basigin

Gene Synonyms

Location

Primary_assembly 2L: 8,083,420-8,116,531 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 10 transcripts (splice variants) and 105 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Bsg-RG	FBtr0079574	8453	648aa	FBpp0079196	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A6P1 Q7KTJ7 Q961I4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Bsg-RF	FBtr0079571	10170	265aa	FBpp0079193	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Bsg-RD	FBtr0079568	10026	265aa	FBpp0079190	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Bsg-RJ	FBtr0332498	8658	266aa	FBpp0304774	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCW5	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Bsg-RC	FBtr0079569	3068	265aa	FBpp0079191	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Bsg-RH	FBtr0079572	3001	265aa	FBpp0079194	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Bsg-RI	FBtr0079573	2933	265aa	FBpp0079195	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Bsg-RA	FBtr0079567	2859	265aa	FBpp0079189	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Bsg-RE	FBtr0079570	2792	265aa	FBpp0079192	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Bsg-RB	FBtr0079566	2744	265aa	FBpp0079188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPG9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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