Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
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DB built by FlyBase

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Gene: scaf6 FBgn0261872

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Description

SR-related CTD associated factor 6

Location

Primary_assembly 3L: 17,036,859-17,042,574 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 117 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
scaf6-RA	FBtr0091474	3071	960aa	FBpp0075048	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q59E33 Q7K2G6 Q8I9J8	NM_001014589 NM_001014589.4 NP_001014589 NP_001014589.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
scaf6-RE	FBtr0345067	2998	251aa	FBpp0311297	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A023GQ04	NM_001038939 NM_001038939.2 NP_001034028 NP_001034028.2
scaf6-RC	FBtr0301554	1415	182aa	FBpp0290769	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86MQ9	NM_001169986 NM_001169986.3 NP_001163457 NP_001163457.1

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Summary

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Gene-based displays