Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: CG42795 FBgn0261928

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Location

Primary_assembly 3R: 10,225,690-10,251,277 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 6 transcripts (splice variants), 288 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42795-RB	FBtr0303602	10201	3068aa	FBpp0292635	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VH10	NM_141731 NM_141731.3 NP_649988 NP_649988.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42795-RG	FBtr0345171	10000	3213aa	FBpp0311381	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH08	NM_001300343 NM_001300343.1 NP_001287272 NP_001287272.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42795-RE	FBtr0345169	9931	3190aa	FBpp0311379	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGZ2	NM_001300341 NM_001300341.1 NP_001287270 NP_001287270.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42795-RA	FBtr0303601	9928	3189aa	FBpp0292634	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCW7	NM_001202279 NM_001202279.2 NP_001189208 NP_001189208.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42795-RF	FBtr0345170	9054	2928aa	FBpp0311380	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH38	NM_001300342 NM_001300342.1 NP_001287271 NP_001287271.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42795-RC	FBtr0332437	8982	2904aa	FBpp0304710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG40	NM_001275526 NM_001275526.2 NP_001262455 NP_001262455.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays