Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
- Genomic alignments
- Gene tree
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- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG43178 FBgn0262807

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Location

Primary_assembly 2R: 10,352,456-10,353,114 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG43178-RA	FBtr0305948	607	21aa	FBpp0297090	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF48	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG43178-RB	FBtr0339456	597	21aa	FBpp0308542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF48	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG43178-RC	FBtr0346950	433	21aa	FBpp0312415	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF48	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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