Summary
- Splice variants
- Transcript comparison
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Sequence
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Dscam4 FBgn0263219

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Description

Down syndrome cell adhesion molecule 4

Gene Synonyms

Location

Primary_assembly 3L: 8,238,647-8,282,398 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 5 transcripts (splice variants), 90 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Dscam4-RI	FBtr0333589	7815	1935aa	FBpp0305766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DMK1 M9PHS6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Dscam4-RD	FBtr0299839	7764	1918aa	FBpp0289117	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8G9	-	-
Dscam4-RH	FBtr0299841	6529	1874aa	FBpp0289119	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0D9	-	-
Dscam4-RJ	FBtr0333590	6454	1935aa	FBpp0305767	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHS6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Dscam4-RE	FBtr0299840	6229	1918aa	FBpp0289118	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8G9 Q3ZAL9	-	-

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Summary

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