Summary
- Splice variants
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DB built by FlyBase

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Gene: hts FBgn0263391

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Description

hu li tai shao

Gene Synonyms

Location

Primary_assembly 2R: 19,397,032-19,424,903 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 16 transcripts (splice variants) and 94 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
hts-RP	FBtr0309113	6053	1833aa	FBpp0301121	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYJ2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
hts-RN	FBtr0309111	4399	1156aa	FBpp0301119	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3KGQ7 Q02645	-	-
hts-RA	FBtr0309104	4163	1156aa	FBpp0301112	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q02645	-	-
hts-RO	FBtr0309112	4161	716aa	FBpp0301120	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K849	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hts-RK	FBtr0309108	4153	1156aa	FBpp0301116	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q02645	-	-
hts-RM	FBtr0309110	4100	718aa	FBpp0301118	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hts-RR	FBtr0309115	3977	739aa	FBpp0301123	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7A5 B8A408	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hts-RS	FBtr0340491	3963	716aa	FBpp0309427	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K849	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hts-RL	FBtr0309109	3854	718aa	FBpp0301117	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hts-RQ	FBtr0309114	3723	739aa	FBpp0301122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7A5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hts-RT	FBtr0475305	2745	675aa	FBpp0423414	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q7Q7	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
hts-RI	FBtr0309106	2643	718aa	FBpp0301114	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hts-RD	FBtr0309102	2582	668aa	FBpp0301110	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NLI3	-	-
hts-RC	FBtr0309103	2531	495aa	FBpp0301111	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
hts-RH	FBtr0309105	2287	495aa	FBpp0301113	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
hts-RJ	FBtr0309107	1945	495aa	FBpp0301115	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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