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DB built by FlyBase

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Gene: nwk FBgn0263456

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Description

nervous wreck

Gene Synonyms

Location

Primary_assembly 3L: 9,137,860-9,145,693 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 10 transcripts (splice variants) and 164 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nwk-RI	FBtr0344239	4596	1075aa	FBpp0310643	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JAU8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
nwk-RF	FBtr0309280	5420	885aa	FBpp0301207	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NF56	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RD	FBtr0309278	4770	1068aa	FBpp0301205	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VSU8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RK	FBtr0344241	4713	1049aa	FBpp0310645	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G2J625 Q9VSU9 X2JC77	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RG	FBtr0331857	4695	1068aa	FBpp0304241	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VSU8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RJ	FBtr0344240	4539	1056aa	FBpp0310644	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JGF9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RB	FBtr0309276	4491	1000aa	FBpp0301203	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NE66	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RL	FBtr0344242	4464	1031aa	FBpp0310646	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCQ1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RH	FBtr0344238	4389	1006aa	FBpp0310642	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J8V0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nwk-RC	FBtr0309277	2629	821aa	FBpp0301204	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PDF3 F2FB98 M9NFQ1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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