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Summary
- Splice variants
- Transcript comparison
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Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: l(3)72Dn FBgn0263605

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Description

lethal (3) 72Dn

Gene Synonyms

Location

Primary_assembly 3L: 16,226,126-16,228,737 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 65 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
l(3)72Dn-RB	FBtr0333565	2323	699aa	FBpp0305742	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFG1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
l(3)72Dn-RA	FBtr0075484	2314	696aa	FBpp0075239	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T021 Q9VUZ6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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