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DB built by FlyBase

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Gene: Slob FBgn0264087

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Description

Slowpoke binding protein

Gene Synonyms

Location

Primary_assembly 2L: 7,642,005-7,675,078 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 11 transcripts (splice variants) and 36 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Slob-RJ	FBtr0330706	6363	1347aa	FBpp0303549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PB66	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Slob-RK	FBtr0335491	5779	1191aa	FBpp0307463	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VLZ5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RH	FBtr0330704	4872	455aa	FBpp0303547	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRE3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RI	FBtr0330705	4664	1280aa	FBpp0303548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C5WLM3 M9PF34	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RB	FBtr0330698	2888	638aa	FBpp0303541	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z388	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RF	FBtr0330702	2553	578aa	FBpp0303545	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRL0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RC	FBtr0330697	2525	515aa	FBpp0303540	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0D4 Q8IPH9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RE	FBtr0330701	2500	511aa	FBpp0303544	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRD7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RA	FBtr0330699	2461	515aa	FBpp0303542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0D4 Q8IPH9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RD	FBtr0330700	2449	511aa	FBpp0303543	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRD7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Slob-RG	FBtr0330703	2293	459aa	FBpp0303546	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRG6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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