Summary
- Splice variants
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- GO: Biological process
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DB built by FlyBase

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Gene: CG43778 FBgn0264308

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Gene Synonyms

Location

Primary_assembly 2L: 13,301,814-13,331,121 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG43778-RE	FBtr0479944	6433	1003aa	FBpp0428276	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EJZ8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG43778-RD	FBtr0331505	6433	451aa	FBpp0303895	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VK03	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG43778-RA	FBtr0331503	6433	963aa	FBpp0303893	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFU0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG43778-RC	FBtr0331504	2595	663aa	FBpp0303894	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4JC95 Q9VK01	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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