Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: spg FBgn0264324

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Description

sponge

Gene Synonyms

Location

Primary_assembly 3R: 28,845,270-28,870,439 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants), 74 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
spg-RE	FBtr0330304	7513	2187aa	FBpp0303336	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VAS8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
spg-RH	FBtr0336766	8052	2002aa	FBpp0307742	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
spg-RG	FBtr0336765	7249	2008aa	FBpp0307741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHD2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
spg-RD	FBtr0330303	6722	2002aa	FBpp0303335	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
spg-RF	FBtr0330305	6710	2008aa	FBpp0303337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHD2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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