sponge
Primary_assembly 3R: 28,845,270-28,870,439 forward strand.
BDGP6.32:AE014297.3
This gene has 5 transcripts (splice variants), 156 orthologues and 3 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| spg-RE | FBtr0330304 | 7513 | 2187aa | FBpp0303336 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VAS8 | NM_170379 NM_170379.5 NP_733258 NP_733258.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| spg-RH | FBtr0336766 | 8052 | 2002aa | FBpp0307742 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z0R2 | NM_001144646.2 NM_001276120 NM_001276120.1 NP_001138118.2 NP_001263049 NP_001263049.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| spg-RG | FBtr0336765 | 7249 | 2008aa | FBpp0307741 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KHD2 | NM_001276118.1 NM_001276119 NM_001276119.1 NP_001263047.1 NP_001263048 NP_001263048.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| spg-RD | FBtr0330303 | 6722 | 2002aa | FBpp0303335 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z0R2 | NM_001144646 NM_001144646.2 NM_001276120.1 NP_001138118 NP_001138118.2 NP_001263049.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| spg-RF | FBtr0330305 | 6710 | 2008aa | FBpp0303337 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KHD2 | NM_001276118 NM_001276118.1 NM_001276119.1 NP_001263047 NP_001263047.1 NP_001263048.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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