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DB built by FlyBase

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Gene: PsGEF FBgn0264598

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Description

Protostome-specific GEF

Location

Primary_assembly X: 2,367,121-2,387,664 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 8 transcripts (splice variants) and 39 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PsGEF-RF	FBtr0333530	9913	2738aa	FBpp0305710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NEH7 Q9W4Z0	NM_130645 NM_130645.6 NP_570001 NP_570001.5	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
PsGEF-RG	FBtr0333531	9605	2033aa	FBpp0305711	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGC1	NM_001272258 NM_001272258.1 NP_001259187 NP_001259187.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
PsGEF-RE	FBtr0333529	9439	2777aa	FBpp0305709	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3KKB2 Q7KVY9 Q9U1M4	NM_206610 NM_206610.5 NP_996333 NP_996333.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical
PsGEF-RH	FBtr0333532	9240	2006aa	FBpp0305712	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGV0	NM_001272259 NM_001272259.1 NP_001259188 NP_001259188.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
PsGEF-RA	FBtr0333526	6966	1529aa	FBpp0305706	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K6U7 Q9W4Y9	NM_130646 NM_130646.3 NP_570002 NP_570002.1
PsGEF-RC	FBtr0333528	6858	1493aa	FBpp0305708	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJB8	NM_001169176 NM_001169176.2 NP_001162647 NP_001162647.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
PsGEF-RI	FBtr0333533	6425	1403aa	FBpp0305713	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGJ2	NM_001272260 NM_001272260.1 NP_001259189 NP_001259189.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
PsGEF-RB	FBtr0333527	2838	786aa	FBpp0305707	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29R48	NM_001169175 NM_001169175.2 NP_001162646 NP_001162646.1

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Summary

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Gene-based displays