Darkener of apricot
Primary_assembly 3R: 28,888,073-28,922,772 forward strand.
BDGP6.32:AE014297.3
This gene has 15 transcripts (splice variants), 133 orthologues and 4 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Doa-RP | FBtr0299751 | 7311 | 2045aa | FBpp0289029 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86B73 | NM_001014681 NM_001014681.4 NP_001014681 NP_001014681.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Doa-RY | FBtr0308599 | 5756 | 1535aa | FBpp0300823 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0C4DHG9 | NM_001043298 NM_001043298.2 NP_001036763 NP_001036763.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RR | FBtr0299747 | 4720 | 1229aa | FBpp0289025 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0EXQ0 Q86B72 | NM_176581 NM_176581.4 NP_788758 NP_788758.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RL | FBtr0299744 | 4312 | 983aa | FBpp0289022 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q29R32 Q8IML9 | NM_001014678 NM_001014678.3 NP_001014678 NP_001014678.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RX | FBtr0308598 | 3967 | 889aa | FBpp0300822 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K6R9 | NM_001260424 NM_001260424.1 NP_001247353 NP_001247353.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RZ | FBtr0308600 | 3958 | 975aa | FBpp0300824 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K7Z3 | NM_001260425 NM_001260425.1 NP_001247354 NP_001247354.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RK | FBtr0299743 | 3693 | 832aa | FBpp0289021 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D5SHS5 P49762 | NM_001014679 NM_001014679.2 NM_001014680.4 NM_001043300.3 NM_001144648.3 NM_001144649.2 NP_001014679 NP_001014679.1 NP_001014680.1 NP_001036765.1 NP_001138120.1 NP_001138121.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RAB | FBtr0479846 | 3168 | 599aa | FBpp0428182 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JRF7 A8WHH0 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RM | FBtr0299753 | 3111 | 580aa | FBpp0289031 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0KI03 Q6IJ25 | NM_001043299 NM_001043299.3 NP_001036764 NP_001036764.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RJ | FBtr0299742 | 3028 | 580aa | FBpp0289020 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | NM_001014680 NM_001014680.4 NM_001043300.3 NM_001144648.3 NM_001144649.2 NP_001014680 NP_001014680.1 NP_001036765.1 NP_001138120.1 NP_001138121.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RT | FBtr0299749 | 2971 | 580aa | FBpp0289027 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | NM_001014680.4 NM_001043300.3 NM_001144648 NM_001144648.3 NM_001144649.2 NP_001014680.1 NP_001036765.1 NP_001138120 NP_001138120.1 NP_001138121.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RS | FBtr0299748 | 2904 | 511aa | FBpp0289026 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z0R6 | NM_001014682 NM_001014682.3 NM_001144650.1 NP_001014682 NP_001014682.1 NP_001138122.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RN | FBtr0299745 | 2221 | 580aa | FBpp0289023 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | NM_001014680.4 NM_001043300 NM_001043300.3 NM_001144648.3 NM_001144649.2 NP_001014680.1 NP_001036765 NP_001036765.1 NP_001138120.1 NP_001138121.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RU | FBtr0299750 | 2164 | 580aa | FBpp0289028 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | NM_001014680.4 NM_001043300.3 NM_001144648.3 NM_001144649 NM_001144649.2 NP_001014680.1 NP_001036765.1 NP_001138120.1 NP_001138121 NP_001138121.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Doa-RV | FBtr0299752 | 2097 | 511aa | FBpp0289030 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z0R6 | NM_001014682.3 NM_001144650 NM_001144650.1 NP_001014682.1 NP_001138122 NP_001138122.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
