Summary
- Splice variants
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DB built by FlyBase

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Gene: Doa FBgn0265998

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Description

Darkener of apricot

Gene Synonyms

Location

Primary_assembly 3R: 28,888,073-28,922,772 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 15 transcripts (splice variants), 198 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Doa-RP	FBtr0299751	7311	2045aa	FBpp0289029	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86B73	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Doa-RY	FBtr0308599	5756	1535aa	FBpp0300823	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHG9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RR	FBtr0299747	4720	1229aa	FBpp0289025	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0EXQ0 Q86B72	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RL	FBtr0299744	4312	983aa	FBpp0289022	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29R32 Q8IML9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RX	FBtr0308598	3967	889aa	FBpp0300822	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6R9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RZ	FBtr0308600	3958	975aa	FBpp0300824	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7Z3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RK	FBtr0299743	3693	832aa	FBpp0289021	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5SHS5 P49762	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RAB	FBtr0479846	3168	599aa	FBpp0428182	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JRF7 A8WHH0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RM	FBtr0299753	3111	580aa	FBpp0289031	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI03 Q6IJ25	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RJ	FBtr0299742	3028	580aa	FBpp0289020	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3J9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RT	FBtr0299749	2971	580aa	FBpp0289027	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3J9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RS	FBtr0299748	2904	511aa	FBpp0289026	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RN	FBtr0299745	2221	580aa	FBpp0289023	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3J9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RU	FBtr0299750	2164	580aa	FBpp0289028	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3J9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Doa-RV	FBtr0299752	2097	511aa	FBpp0289030	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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