Summary
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DB built by FlyBase

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Gene: wake FBgn0266418

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Description

wide awake

Gene Synonyms

Location

Primary_assembly 3R: 22,639,808-22,683,827 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 7 transcripts (splice variants) and 9 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
wake-RG	FBtr0344408	5917	1648aa	FBpp0310776	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X4YX01	NM_001300540 NM_001300540.1 NP_001287469 NP_001287469.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
wake-RC	FBtr0344405	7092	1553aa	FBpp0310773	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6W6 D0Z761	NM_001260314 NM_001260314.3 NP_001247243 NP_001247243.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wake-RH	FBtr0344409	6723	1403aa	FBpp0310777	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHH4	NM_001300541 NM_001300541.1 NP_001287470 NP_001287470.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wake-RE	FBtr0344407	5224	1417aa	FBpp0310775	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6D0	NM_001260315.1 NM_001260316 NM_001260316.1 NP_001247244.1 NP_001247245 NP_001247245.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wake-RD	FBtr0344406	5188	1417aa	FBpp0310774	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6D0	NM_001260315 NM_001260315.1 NM_001260316.1 NP_001247244 NP_001247244.1 NP_001247245.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wake-RF	FBtr0344403	4973	1255aa	FBpp0310771	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCW7	NM_001202337.2 NM_142819 NM_142819.3 NP_001189266.1 NP_651076 NP_651076.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wake-RB	FBtr0344404	4933	1255aa	FBpp0310772	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RQ9 Q9VCW7	NM_001202337 NM_001202337.2 NM_142819.3 NP_001189266 NP_001189266.1 NP_651076.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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