Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG45089 FBgn0266490

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Location

Primary_assembly X: 7,893,053-7,893,798 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 8 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG45089-RC	FBtr0344537	649	54aa	FBpp0310888	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCX4	NM_001298060.1 NM_001298061.1 NM_001298062 NM_001298062.1 NP_001284989.1 NP_001284990.1 NP_001284991 NP_001284991.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG45089-RB	FBtr0344536	509	54aa	FBpp0310887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCX4	NM_001298060.1 NM_001298061 NM_001298061.1 NM_001298062.1 NP_001284989.1 NP_001284990 NP_001284990.1 NP_001284991.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG45089-RA	FBtr0344535	487	54aa	FBpp0310886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCX4	NM_001298060 NM_001298060.1 NM_001298061.1 NM_001298062.1 NP_001284989 NP_001284989.1 NP_001284990.1 NP_001284991.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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