Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: pit FBgn0266581

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Description

pitchoune

Gene Synonyms

Location

Primary_assembly 3R: 22,034,298-22,038,925 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 193 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pit-RC	FBtr0346345	2803	680aa	FBpp0312062	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHF7 Q9VD51	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
pit-RB	FBtr0084174	2324	680aa	FBpp0083572	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHF7 Q9VD51	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
pit-RA	FBtr0084175	2270	680aa	FBpp0083573	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHF7 Q9VD51	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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