Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: nw FBgn0283508

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Description

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Gene Synonyms

Location

Primary_assembly 2R: 17,502,354-17,508,645 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 5 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nw-RC	FBtr0305703	2338	491aa	FBpp0296983	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3KGN2 O16054 Q7K140	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
nw-RA	FBtr0305701	2450	194aa	FBpp0296981	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZAU2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
nw-RB	FBtr0305702	2447	193aa	FBpp0296982	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCT4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
nw-RE	FBtr0305705	2012	490aa	FBpp0296985	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZAU3	-	-
nw-RD	FBtr0305704	1962	194aa	FBpp0296984	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZAU2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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